Date Palm SNPs Markers Database

        Al-Dous et al., 2011 identified 3,518,029 SNPs in 381 Mb that were polymorphic in at least one of the sequenced genomes. Here we integreted ~3.5M polymorphic sites for each of 9 genomes in our database. 0 indicates no detected difference from the Khalas female reference (PdactyKAsm30_r20101206.fasta.gz), A/C/G/T indicates homozygous difference from the Khalas reference and heterozygous calls R indicates (A or G ), Y indicate (C or T), S indicate (G or C), W indicate (A or T), K indicate (G or T), M indicate (A or C), B indicate (C or G or T), D indicate (A or G or T), H indicate (A or C or T), V indicate (A or C or G). For details on the assembly methods, and polymoprhism calling please see the original publication and supplementary data (Al-Dous et al., Nature Biotechnology, 2011).